The detailed information of tRNA gene sequence


Sequence ID>WENV170975266
Genome IDMTKY01100224
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 134
End posion on genome 44
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgttttttcC
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCGCGCTTGGAAAGCGCGTGTGCGCCGCAAGGTG
TACCGCGGGTTCGAATCCCGCCCTCTCCGTtc
Downstream region at tRNA end position 
ctgcaggagg
Secondary structure (Cloverleaf model)
>WENV170975266	Ser	GGA
                   C      GTtc ctgcaggagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTGCGCCGCAAGGTGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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