The detailed information of tRNA gene sequence


Sequence ID>WENV170975270
Genome IDMTKZ01000030
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 117139
End posion on genome 117213
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggatgttttt
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGTCAGAGCAGCTGATTTGTAATCAGCAGGTCGTGGGTTCGAA
TCCCTCTATCGGCTCgg
Downstream region at tRNA end position 
ttgttgtttg
Secondary structure (Cloverleaf model)
>WENV170975270	Thr	TGT
                   t      TCgg ttgttgtttg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G + T          T A
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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