The detailed information of tRNA gene sequence


Sequence ID>WENV170975274
Genome IDMTKZ01000030
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 118783
End posion on genome 118856
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgtgtctgat
tRNA gene sequence 
AGGGGCATAGTTTAAGGGTAGAATAGCGGTCTCCAAAACCGTTGATGGGCGTTCGAGTCG
CTCTGCCCCTGCAA
Downstream region at tRNA end position 
atacaggatg
Secondary structure (Cloverleaf model)
>WENV170975274	Trp	CCA
                   t      GCAA atacaggatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C T C G C     A
        A A        A      | + | | |     G
      G     T T T G       G G G C G     C
      G     + | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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