The detailed information of tRNA gene sequence


Sequence ID>WENV170975291
Genome IDMTKZ01000065
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 21372
End posion on genome 21446
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggcggtcac
tRNA gene sequence 
GCGCGTATAGCTCAGCGGTAGAGCTCTGGTCTTACACACCAGCGGTCGTAGGTTCAAATC
CTACTGCGCGCACCA
Downstream region at tRNA end position 
cggttaccac
Secondary structure (Cloverleaf model)
>WENV170975291	Val	TAC
                   c      ACCA cggttaccac
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T + G
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     A
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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