The detailed information of tRNA gene sequence


Sequence ID>WENV170975296
Genome IDMTKZ01000075
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7471
End posion on genome 7396
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgttcgttc
tRNA gene sequence 
GGGGGCGTGGTGTAGCGGCTAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCGAAC
CCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
gaaataaaaa
Secondary structure (Cloverleaf model)
>WENV170975296	Asp	GTC
                   c      GCCA gaaataaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      T A          G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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