The detailed information of tRNA gene sequence


Sequence ID>WENV170975300
Genome IDMTKZ01000092
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 148647
End posion on genome 148562
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cagaaatttt
tRNA gene sequence 
GGACAGGTGGTCGAGTGGTTAATGGCACTGGGCTGTAAACCCAGCGACGAAAGTCTACGG
AGGTTCGAATCCTTCCCTGTCCACCA
Downstream region at tRNA end position 
tttatagcgg
Secondary structure (Cloverleaf model)
>WENV170975300	Tyr	GTA
                   t      ACCA tttatagcgg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | + | | |     G
    G       G C T G       G G A G G     C
    G       + | + |                 T T
    T       T G G C
      T A A        A     CGACGAAAGTCTAC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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