The detailed information of tRNA gene sequence


Sequence ID>WENV170975310
Genome IDMTKZ01000108
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 36125
End posion on genome 36039
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaatagtgt
tRNA gene sequence 
GCCGGAGTGGTGGAATAGGTAGACACAAGGGACTTAAAATCCCTCGGACTTTTGTCCGTG
CCGGTTCAAGTCCGGCCTCTGGTACCA
Downstream region at tRNA end position 
ttgcgggaat
Secondary structure (Cloverleaf model)
>WENV170975310	Leu	TAA
                   t      ACCA ttgcgggaat
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    A       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGACTTTTGTCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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