The detailed information of tRNA gene sequence


Sequence ID>WENV170975314
Genome IDMTKZ01000117
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 72807
End posion on genome 72882
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ctgtaaatgt
tRNA gene sequence 
GGCGAGATAGCTCAGACGGTAGAGCAGAGGCCTGAAAAGCCTTGTGTCCCCAGTTCAATT
CTGGGTCTCGCCACCA
Downstream region at tRNA end position 
tttatatttt
Secondary structure (Cloverleaf model)
>WENV170975314	Phe	GAA
                   t      ACCA tttatatttt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G G T C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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