The detailed information of tRNA gene sequence


Sequence ID>WENV170975323
Genome IDMTKZ01000117
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 193234
End posion on genome 193145
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaataaataa
tRNA gene sequence 
GGAGAGTTGCCAGAGTGGTTGATCGGGACGGTCTCGAAAACCGTTGTATCCTTACGGATA
CCCAGGGTTCAAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
taatattatg
Secondary structure (Cloverleaf model)
>WENV170975323	Ser	CGA
                   a      GCCA taatattatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G A C C       C A G G G     C
    G       +   | |                 T T
    T       T C G G
      T G A        G     TGTATCCTTACGGATACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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