The detailed information of tRNA gene sequence


Sequence ID>WENV170975325
Genome IDMTKZ01000118
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5527
End posion on genome 5452
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
tgaccgggct
tRNA gene sequence
GGGCGCTTGGCGCAGTGGTTAGCGCGTCTCGTTTACACCGAGTAGGTCGGGGGTTCGAAT
CCCTCAGCGCCCACCA
Downstream region at tRNA end position
tctttcccgc
Secondary structure (Cloverleaf model)
>WENV170975325	Val	TAC
                   t      ACCA tctttcccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       C G C G       G G G G G     C
    G       | | | |                 T T
    T       G C G C
      T A          G     AGGTC
                    T   T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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