The detailed information of tRNA gene sequence


Sequence ID>WENV170975329
Genome IDMTKZ01000134
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1560
End posion on genome 1471
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaaaattgc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCAGCGGTCTTGAAAACCGCAGTGGACGCAAGTTCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCT
Downstream region at tRNA end position 
gggattgaca
Secondary structure (Cloverleaf model)
>WENV170975329	Ser	TGA
                   c      GCCT gggattgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        A     AGTGGACGCAAGTTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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