The detailed information of tRNA gene sequence


Sequence ID>WENV170975330
Genome IDMTKZ01000134
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1435
End posion on genome 1346
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccttcgcat
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGTCGATTGGGGCCGCCTGCTAAGCGGTTACCGGGCTAAAACTC
GGTCATGGGTTCGAATCCCATCCTCCCCGCtc
Downstream region at tRNA end position 
caacgttccg
Secondary structure (Cloverleaf model)
>WENV170975330	Ser	GCT
                   t      GCtc caacgttccg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TACCGGGCTAAAACTCGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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