The detailed information of tRNA gene sequence


Sequence ID>WENV170975332
Genome IDMTKZ01000154
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4106
End posion on genome 4180
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggtccccca
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCATGCGGCTCATATCCGCAGAGTCCGGGGTTCAAA
TCCCTGCGCCGCCACtt
Downstream region at tRNA end position 
catttccctt
Secondary structure (Cloverleaf model)
>WENV170975332	Met	CAT
                   a      ACtt catttccctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GAGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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