The detailed information of tRNA gene sequence


Sequence ID>WENV170975342
Genome IDMTKZ01000182
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 72843
End posion on genome 72752
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taatttaaaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCTAAGGCGCGCGCCTGGAAAGTGCGTAAACTCCAAAAGGG
TTTCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Downstream region at tRNA end position 
gctataaaaa
Secondary structure (Cloverleaf model)
>WENV170975342	Ser	GGA
                   a      GCCA gctataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  T         A G G C
    C T A          G     TAAACTCCAAAAGGGTTTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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