The detailed information of tRNA gene sequence


Sequence ID>WENV170975344
Genome IDMTKZ01000185
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 77140
End posion on genome 77065
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atattttaga
tRNA gene sequence 
CGCGAGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCGAAT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
tttttttata
Secondary structure (Cloverleaf model)
>WENV170975344	Met	CAT
                   a      ACCA tttttttata
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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