The detailed information of tRNA gene sequence


Sequence ID>WENV170975345
Genome IDMTKZ01000185
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 77013
End posion on genome 76937
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggtaagcg
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTCAGAGCGTCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCACCGCTACCA
Downstream region at tRNA end position 
aaaaatgcgc
Secondary structure (Cloverleaf model)
>WENV170975345	Met	CAT
                   g      ACCA aaaaatgcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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