The detailed information of tRNA gene sequence


Sequence ID>WENV170975368
Genome IDMTKZ01000263
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 48383
End posion on genome 48297
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gtgttcgcgt
tRNA gene sequence 
GGCGGGGTTCCCGAGCGGTCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAACGCCTTCG
GTGGTTCGAATCCACCCCTCGCCACCA
Downstream region at tRNA end position 
tctgttacgg
Secondary structure (Cloverleaf model)
>WENV170975368	Tyr	GTA
                   t      ACCA tctgttacgg
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C C A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G G T G G     C
    G         | | |                 T T
    T       A G G G
      C A A        G     TGGCTCAACGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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