The detailed information of tRNA gene sequence


Sequence ID>WENV170975377
Genome IDMTKZ01000293
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 53144
End posion on genome 53059
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatggtgag
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTTTACCCATGG
GGGTTCGAGTCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gtaaatatag
Secondary structure (Cloverleaf model)
>WENV170975377	Ser	TGA
                   g      GCCA gtaaatatag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTTTACCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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