The detailed information of tRNA gene sequence


Sequence ID>WENV170975384
Genome IDMTKZ01000317
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 29005
End posion on genome 28911
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattgaaaac
tRNA gene sequence 
GGAGATGTGTCCGAGCTGGCTGAAGGAGCACGATTGGAAATCGTGTATATGTGCAAAAAC
GCATATCCTGGGTTCGAATCCCAGCATCTCCGCCA
Downstream region at tRNA end position 
gattttttaa
Secondary structure (Cloverleaf model)
>WENV170975384	Ser	GGA
                   c      GCCA gattttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G A C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       C T G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TATATGTGCAAAAACGCATATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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