The detailed information of tRNA gene sequence


Sequence ID>WENV170975387
Genome IDMTKZ01000335
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 37887
End posion on genome 37810
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctgtgttc
tRNA gene sequence 
GGGCTCGTAGCTCAGTTTGGTTAGAGCTTCCGGCTCATAACCGGGCGGTCGGTGGTTCGA
CTCCACCCGAGCCCACCA
Downstream region at tRNA end position 
gaaggcggca
Secondary structure (Cloverleaf model)
>WENV170975387	Met	CAT
                   c      ACCA gaaggcggca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C A C C     A
    T T G A        A      | | | | |     G
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          T     CGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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