The detailed information of tRNA gene sequence


Sequence ID>WENV170975396
Genome IDMTKZ01000364
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 81643
End posion on genome 81568
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agttgttcag
tRNA gene sequence 
GCCCCCTTCGTCTAGCGGCCTAGGACGCCGCCCTCTCAAGGCGGTAGCGCGGGTTCAAAT
CCCGTAGGGGGTACAA
Downstream region at tRNA end position 
atcgaaggcg
Secondary structure (Cloverleaf model)
>WENV170975396	Glu	CTC
                   g      ACAA atcgaaggcg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
      C G A        C      + | | | |     A
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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