The detailed information of tRNA gene sequence


Sequence ID>WENV170975402
Genome IDMTKZ01000397
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6349
End posion on genome 6272
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccagtagaag
tRNA gene sequence 
GGGGTTGTAGGGTAGCCTGGTCCATCCTACAGCGTTCGGGACGCTGTGACCTGAGTTCGA
ATCTCAGCAACCCCATCA
Downstream region at tRNA end position 
tactcttcct
Secondary structure (Cloverleaf model)
>WENV170975402	Pro	CGG
                   g      ATCA tactcttcct
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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