The detailed information of tRNA gene sequence


Sequence ID>WENV170975407
Genome IDMTKZ01000437
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9985
End posion on genome 9910
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccggtcacag
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCCC
Downstream region at tRNA end position 
tggactgtca
Secondary structure (Cloverleaf model)
>WENV170975407	Trp	CCA
                   g      GCCC tggactgtca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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