The detailed information of tRNA gene sequence


Sequence ID>WENV170975411
Genome IDMTKZ01000449
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 38458
End posion on genome 38382
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aagcagcacc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCGTTGCGTTGACATCGCAAAGGTCGTAGGTTCGAG
TCCTATACCGCCCACCA
Downstream region at tRNA end position 
caaaacacca
Secondary structure (Cloverleaf model)
>WENV170975411	Val	GAC
                   c      ACCA caaaacacca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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