The detailed information of tRNA gene sequence


Sequence ID>WENV170975426
Genome IDMTKZ01000554
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39270
End posion on genome 39344
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gacaggacgt
tRNA gene sequence 
GGCGCATTCGTCTAGCGGCCTAGGACACCGCCCTCTCAAGGCGGAGATCACGGGTTCGAA
TCCCGTATGCGCTACac
Downstream region at tRNA end position 
tcgcgcggcc
Secondary structure (Cloverleaf model)
>WENV170975426	Glu	CTC
                   t      ACac tcgcgcggcc
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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