The detailed information of tRNA gene sequence


Sequence ID>WENV170975432
Genome IDMTKZ01000600
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 32409
End posion on genome 32334
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgggcgttc
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGTGAGAGCAGAGGACTCATAATCCTTCGGTCGTGGGTTCGATC
CCCACCAGGCCCACCC
Downstream region at tRNA end position 
gaatcgacca
Secondary structure (Cloverleaf model)
>WENV170975432	Met	CAT
                   c      ACCC gaatcgacca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      G A          A     CGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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