The detailed information of tRNA gene sequence


Sequence ID>WENV170975433
Genome IDMTKZ01000600
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28204
End posion on genome 28130
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggccgcttc
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGTTAGAGCACCTCCCTTACAAGGAGGGGGTCGGGGGTTCGAG
TCCCTCAGCGCCCACtc
Downstream region at tRNA end position 
tcactcccgt
Secondary structure (Cloverleaf model)
>WENV170975433	Val	TAC
                   c      ACtc tcactcccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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