The detailed information of tRNA gene sequence


Sequence ID>WENV170975442
Genome IDMTKZ01000652
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12866
End posion on genome 12938
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccagcgct
tRNA gene sequence 
GGCGAGGTAGCTCAATGGTGGAGCAGTGGACTCATAAGCCATTGGATGTGGGTTCAAATC
CCACCCTCGCCACtt
Downstream region at tRNA end position 
aaatataaac
Secondary structure (Cloverleaf model)
>WENV170975442	Met	CAT
                   t      ACtt aaatataaac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
        A A        A      | | | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     TGGAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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