The detailed information of tRNA gene sequence


Sequence ID>WENV170975453
Genome IDMTKZ01000732
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4539
End posion on genome 4613
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttttgagtaa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGCTAGAGCACATCGCTGGCAGCGATGGGGTCAGGGGTTCAAA
TCCCCTCAGGTCCACtt
Downstream region at tRNA end position 
ttgaattttc
Secondary structure (Cloverleaf model)
>WENV170975453	Ala	GGC
                   a      ACtt ttgaattttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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