The detailed information of tRNA gene sequence


Sequence ID>WENV170975462
Genome IDMTKZ01000777
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 408
End posion on genome 332
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cttgtccgcg
tRNA gene sequence 
GCGGGTGTAGCTCAGTCGGTTAGAGCGCCAGGTTGTGGCCCTGGAGGCCGGGAGTTCAAG
TCTCCTCACTCGCCCCA
Downstream region at tRNA end position 
ttcctccttc
Secondary structure (Cloverleaf model)
>WENV170975462	His	GTG
                   g      CCCA ttcctccttc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T C C T C     A
      T G A        A      + | | | |     A
    C       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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