The detailed information of tRNA gene sequence


Sequence ID>WENV170975469
Genome IDMTKZ01000788
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2369
End posion on genome 2279
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccagacgt
tRNA gene sequence 
GGAGGCTTACCCAAGCGGCTGAAGGGGTCGGTCTTGAAAACCGATAGAGGATGCAAGTCC
TGCTAGGGTTCAAATCCCTAAGCCTCCGCCA
Downstream region at tRNA end position 
ttcacgatac
Secondary structure (Cloverleaf model)
>WENV170975469	Ser	TGA
                   t      GCCA ttcacgatac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     A T C C C     A
      C G A        A      | | | | |     A
    G       A C C C       T A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGAGGATGCAAGTCCTGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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