The detailed information of tRNA gene sequence


Sequence ID>WENV170975474
Genome IDMTKZ01000802
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1190
End posion on genome 1103
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtggtgaat
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCGACGGTCTTGAAAACCGTTGAGGTGCAAGCCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
ctcaaacttc
Secondary structure (Cloverleaf model)
>WENV170975474	Ser	TGA
                   t      GCCA ctcaaacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGAGGTGCAAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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