The detailed information of tRNA gene sequence


Sequence ID>WENV170975475
Genome IDMTKZ01000827
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 65659
End posion on genome 65747
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaggattcc
tRNA gene sequence 
GGAGAGGTGTAGGAGTGGCTGAACTAGCACGCCTGGAAAGCGTGTGTTCCCCAAAAGGGA
ACCGGGGGTTCGAATCCCCCTCTCTCCGCtc
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV170975475	Ser	GGA
                   c      GCtc tttttaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A T       G G G G G     C
    G         | | |                 T T
    C       A C T A
      T G A        G     TGTTCCCCAAAAGGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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