The detailed information of tRNA gene sequence


Sequence ID>WENV170975476
Genome IDMTKZ01000829
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 44469
End posion on genome 44377
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacgcctgc
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGTCGATGGAGCACGATTGGAAATCGTGTAGGGTGTGAAAACG
CCCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cgttcccccg
Secondary structure (Cloverleaf model)
>WENV170975476	Ser	GGA
                   c      GCCA cgttcccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G         + | | |                 T T
  T         T G G A
    C G A          G     TAGGGTGTGAAAACGCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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