The detailed information of tRNA gene sequence


Sequence ID>WENV170975484
Genome IDMTKZ01000863
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 35531
End posion on genome 35435
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccagacacgc
tRNA gene sequence 
GGGAGCGGAAGGGGGCTGGTGTCCCTCCCGGACTTCAAATCCGGCGCCGGGTGCTCAAAC
CATCCTGGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
caatccggtg
Secondary structure (Cloverleaf model)
>WENV170975484	SeC(p)	TCA
                   c      GCCA caatccggtg
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C G        A      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G T          C     CGCCGGGTGCTCAAACCATCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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