The detailed information of tRNA gene sequence


Sequence ID>WENV170975492
Genome IDMTKZ01000922
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5282
End posion on genome 5208
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacccatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGGGTTCGAATC
CTCCCTCCGCTACAA
Downstream region at tRNA end position 
gaggagactc
Secondary structure (Cloverleaf model)
>WENV170975492	Met	CAT
                   t      ACAA gaggagactc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | + | |     G
      T     C G A G       G G G G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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