The detailed information of tRNA gene sequence


Sequence ID>WENV170975496
Genome IDMTKZ01000927
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 29770
End posion on genome 29860
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggggccgtgc
tRNA gene sequence 
GGAGGGGTGCCGGAGAGGTCGATCGGGGCGGTCTCGAAAACCGTTGACTCCCTAGTGGGG
TCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gcctgccctg
Secondary structure (Cloverleaf model)
>WENV170975496	Ser	CGA
                   c      GCCA gcctgccctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGACTCCCTAGTGGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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