The detailed information of tRNA gene sequence


Sequence ID>WENV170975498
Genome IDMTKZ01000928
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2139
End posion on genome 2062
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgcaggcgtt
tRNA gene sequence 
CGGGGCGTGGCTCAGTCCGGCTAGAGCACTCGGTTCGGGACCGAGAGGTCGGCGGTTCAA
ATCCGCCCGCCCCGACCA
Downstream region at tRNA end position 
acaagaggtc
Secondary structure (Cloverleaf model)
>WENV170975498	Pro	CGG
                   t      ACCA acaagaggtc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C G C C     A
    C T G A        G      | | | | |     A
  C         C T C G       G G C G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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