The detailed information of tRNA gene sequence


Sequence ID>WENV170975505
Genome IDMTKZ01000941
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 525523
End posion on genome 525449
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaagcacaa
tRNA gene sequence 
GGCCCTGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAG
TCCCGTCAGGGTCGCtg
Downstream region at tRNA end position 
taggttcggt
Secondary structure (Cloverleaf model)
>WENV170975505	Asp	GTC
                   a      GCtg taggttcggt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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