The detailed information of tRNA gene sequence


Sequence ID>WENV170975512
Genome IDMTKZ01000947
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19231
End posion on genome 19157
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gcgacagggt
tRNA gene sequence 
GGGCTCGTAGCTCAGTTAGGTAGAGCGCCTGGCTTTTAACCAGGTGGTCGGGGGTTCAAA
TCCCTCCGGGCCCGCtg
Downstream region at tRNA end position 
ccgcgaagcg
Secondary structure (Cloverleaf model)
>WENV170975512	Lys	TTT
                   t      GCtg ccgcgaagcg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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