The detailed information of tRNA gene sequence


Sequence ID>WENV170975522
Genome IDMTKZ01001029
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 77936
End posion on genome 78012
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctcctaggc
tRNA gene sequence 
GGGGCCGTAGTTCAGTTGGTTAGAACGCTGGCCTGTCACGTCAGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
aacctttccc
Secondary structure (Cloverleaf model)
>WENV170975522	Asp	GTC
                   c      GCCA aacctttccc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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