The detailed information of tRNA gene sequence


Sequence ID>WENV170975529
Genome IDMTKZ01001053
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15253
End posion on genome 15338
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtcacaaga
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGAATCGGCACGCTTGGAAAGCGTGTGAGGGGCAACCCTCC
GTGGGTTCAAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
ggcggtcgcg
Secondary structure (Cloverleaf model)
>WENV170975529	Ser	GGA
                   a      GCtc ggcggtcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A G C       G T G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGAGGGGCAACCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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