The detailed information of tRNA gene sequence


Sequence ID>WENV170975536
Genome IDMTKZ01001118
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1373
End posion on genome 1276
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gatttctcaa
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGCGCTAGAA
CCGTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
attatcaaat
Secondary structure (Cloverleaf model)
>WENV170975536	SeC(p)	TCA
                   a      GCCA attatcaaat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAGAACCGTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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