The detailed information of tRNA gene sequence


Sequence ID>WENV170975541
Genome IDMTKZ01001141
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24313
End posion on genome 24220
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaatttgc
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTACGCCCCCAAAGG
TGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttgtga
Secondary structure (Cloverleaf model)
>WENV170975541	Ser	GGA
                   c      GCCA ttttttgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTACGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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