The detailed information of tRNA gene sequence


Sequence ID>WENV170975569
Genome IDMTKZ01001293
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7188
End posion on genome 7112
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
catccaccat
tRNA gene sequence 
GGGTGGATAGTTTGAATTGGTTAAAACAGTAGTCTCCAAAACTACAGTCATGGGTTCGAT
TCCCATTCCACCTACCA
Downstream region at tRNA end position 
ttttaactaa
Secondary structure (Cloverleaf model)
>WENV170975569	Trp	CCA
                   t      ACCA ttttaactaa
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T          T T
                    T     T A C C C     A
    T A A G        A      | | | | |     G
  T         T T T G       A T G G G     C
  G         | | | |                 T T
  G         A A A C
    T T A          A     AGTC
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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