The detailed information of tRNA gene sequence


Sequence ID>WENV170975582
Genome IDMTKZ01001380
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1509
End posion on genome 1585
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcggcgccac
tRNA gene sequence 
GGGGACGTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCGTGGGTTCGAG
TCCCATCGTCTCCACCA
Downstream region at tRNA end position 
cgcaagatcc
Secondary structure (Cloverleaf model)
>WENV170975582	Ala	TGC
                   c      ACCA cgcaagatcc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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