The detailed information of tRNA gene sequence


Sequence ID>WENV170975584
Genome IDMTKZ01001391
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13524
End posion on genome 13600
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcgaaggatt
tRNA gene sequence 
CGGGGCGTAGCGTAGCTTGGTAGCGCGTCTGAATGGGGTTCAGAAGGTCGTGAGTTCAAA
TCTCACCGCCCCGACCA
Downstream region at tRNA end position 
ttttttcgca
Secondary structure (Cloverleaf model)
>WENV170975584	Pro	GGG
                   t      ACCA ttttttcgca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        A      | | | | |     A
    T       T G C G       G T G A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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