The detailed information of tRNA gene sequence


Sequence ID>WENV170975591
Genome IDMTKZ01001405
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16358
End posion on genome 16434
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acgtaagttt
tRNA gene sequence 
CGGGGAGTAGCGCAGCATGGGAGCGCACTCGCTTGGGGTGCGAGTGGTCGGCGGTTCAAA
TCCGCTCTCCCCGACCA
Downstream region at tRNA end position 
agtcttcagt
Secondary structure (Cloverleaf model)
>WENV170975591	Pro	GGG
                   t      ACCA agtcttcagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C G C C     A
      C G A        A      + | | | |     A
    A       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G G A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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