The detailed information of tRNA gene sequence


Sequence ID>WENV170975602
Genome IDMTKZ01001441
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 41543
End posion on genome 41452
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcggataatt
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCCGCCTATCGGTG
GACCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aactcatcag
Secondary structure (Cloverleaf model)
>WENV170975602	Ser	TGA
                   t      GCCA aactcatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGCCTATCGGTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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