The detailed information of tRNA gene sequence


Sequence ID>WENV170975621
Genome IDMTKZ01001568
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1496
End posion on genome 1420
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggcggttcc
tRNA gene sequence 
GGGCGCATAGCTCAGTTGGTTAGAGCACCTGCCTTACAAGCAGGGGGTCAGGGGTTCGAG
TCCCTTTGCGCCCACCC
Downstream region at tRNA end position 
agtgatgtcc
Secondary structure (Cloverleaf model)
>WENV170975621	Val	TAC
                   c      ACCC agtgatgtcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     T T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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